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The Science of Size:

Rebecca Heald Explores Size Control in Amphibians

By Chris Palmer

Rebecca Heald

GREW UP IN: Greenville, Pennsylvania

STUDIED AT: Hamilton College, Rice University, Harvard Medical School

JOB SITE: University of California, Berkeley

FAVORITE HOBBY: Cycling

Courtesy: Mark Hanson

A 50-pound frog isn’t some freak of nature or a creepy Halloween prank. It’s a thought experiment—an experiment carried out only in one’s imagination—conceived by Rebecca Heald, a cell biologist at the University of California, Berkeley, who is studying the factors that control size in animals.

Heald’s “50-pound frog project” speaks to the power of evolution and to scientists’ ability to modify the physical characteristics of an organism by altering its genome. The project also incorporates many of Heald’s fascinating discoveries studying amphibian eggs and embryos.

In amphibians, unlike in mammals, there are striking correlations among the size of the animals’ genomes (an organism’s complete set of genes; for more about genomes see “There’s an ‘Ome’ for That”) and several aspects of the animals’ size. For example, amphibians with large genomes tend to be bigger than those with smaller genomes. Larger genomes also correspond to larger cells and larger organelles (specialized cellular structures such as the nucleus). Heald has also demonstrated that these seemingly fixed parameters can be tweaked in the lab.

International Woman of Science

1. Grew up in Pennslyvania, USA; 2. Parents’ sabbaticals in Australia and New Zealand; 3.College in  New York, USA; 4. Grad school in Massachusetts, USA; 5. Postdoc in Texas, USA; 6. Postdoc in Heidelberg, Germany; 7. Faculty Position in California, USA; 8. Sabbatical in Toulouse, France.

Heald’s globetrotting adventures allowed her to experience how different cultures “do” science.

Way before dreaming up ways to design the frogs of people’s nightmares in her lab, Heald was fond of science. She remembers starting out with more mundane experiments in middle and high school, such as distilling gases from burning wood, dissecting fly embryo salivary glands and examining microorganisms under a microscope.

“I definitely thought microscopy was just this whole new world, a whole new way of seeing things,” she recalls.

Even earlier than these formative experiences, Heald found herself attracted to life as a scientist for other, more ethereal reasons. She would often accompany her chemistry professor father to his lab at Thiel College, a small liberal arts school in northwestern Pennsylvania, where she recalls enjoying the ambiance. She was even more impressed by living with her parents in Australia and New Zealand during their sabbaticals.

“I think those experiences had a big influence on my interest in the academic lifestyle, that you could go live other places and work with interesting people,” says Heald.

After completing a Ph.D. at Harvard Medical School, Heald arranged her own international excursion by working as a researcher for 3 years in Germany.

“It was exciting to see how a different culture does science,” she recalls.

Spindle

The spindle, composed of thousands of microtubules (green, thinner and longer strands), grabs hold of chromosomes (purple, thicker, shorter, darker areas at the edges), which replicate during cell division. As the cell divides, the spindles will separate the paired chromosomes so that each daughter cell will contain a complete set of chromosomes.

During her time in Germany, Heald studied the football-shaped cellular structure called the spindle, which is composed of thousands of thin fibers called microtubules. During cell division, chromosomes replicate, yielding two copies of each chromosome connected together. Spindle fibers attach to the chromosomes, pull them apart and move the previously paired chromosomes to opposite ends of the cell. The goal of the whole process is for each daughter cell to contain a single copy of each chromosome—a complete genome.

Heald discovered that spindles can form in the absence of chromosomes. Instead of attaching onto chromosomes, the spindles unite around DNA-coated beads through a process of “self-organization.” This finding earned her a faculty position at Berkeley, where she set out to compile the minimum parts list necessary to make a functional spindle.

Because spindles are made of microtubules along with about a thousand other proteins and other various components, Heald estimates it could take more than a decade to tease out what are the critical factors that, when combined, would be sufficient to reconstitute the spindle.

When it came time for her first sabbatical a few years after landing her job at Berkeley, Heald again looked abroad, spending a year doing research in Toulouse, France. Her project focused on how microtubules organize during muscle development. An avid cyclist, she took advantage of down times in the lab by racing through the Alps and Pyrenees mountain ranges.

At home in Berkeley, Heald enjoys cycling down by the San Francisco Bay and powering up the Berkeley Hills to the east. For the past 10 years or so, she has completed what she calls “Triathlon Thursdays.” These early-morning blitzes begin at 7:00. Instead of the traditional bike, swim and run, Heald meets up with a friend or colleague for a long bike ride. She then comes home and sinks into a bath. She wraps up by taking her dog, Louis, for a walk before heading to her lab.

Spindle Science

Heald first fell in love with frog eggs as a research system during her early studies of cell division. She was fascinated that spindle formation requires neither proper chromosomes nor intact cells. All it needs is isolated cytoplasm—the gel-like substance in which a cell’s organelles are embedded—and some DNA, either in the form of chromosomes or DNA-coated beads.

To figure out which molecules are necessary for spindle assembly, Heald uses a cytoplasm extract, which contains all the components necessary to build a cell but lacks chromosomes. To obtain this extract, she and her colleagues collect thousands of eggs from the African frog Xenopus laevis. They then remove the eggs’ jelly-like outer coating and put them in a centrifuge tube. Spinning the eggs in a centrifuge crushes them and separates the egg contents so that the cytoplasm can be isolated.

The scientists then add chromosomes (usually from frog sperm) to the extract, together with fluorescent tags attached to various spindle proteins, and use microscopes to observe the spindle form.

By manipulating the proteins in the egg extract mixture and substituting different kinds of DNA-coated beads for the chromosomes, Heald learns which factors are needed for spindle assembly. She uses this information to support her long-term goal of building a spindle from a defined set of parts.

Size Matters

The African clawed frog (Xenopus laevis) is ideal for studying the connection between body size and spindle size. Courtesy: Wikimedia Commons, H. Krisp

While her research into spindles was progressing, a colleague at Berkeley introduced Heald to a related frog, Xenopus tropicalis, that is smaller than the one she had been working with and also has a smaller genome. X. tropicalis is the size of a kiwifruit, whereas X. laevis is the size of an orange. Heald was enthralled with the fact that X. tropicalis was smaller and its eggs, as well as the spindles formed in its egg extracts, were too.

Realizing that body size seemed to correspond to spindle size was exciting because it provided an experimental system to investigate how spindle size is determined. Heald and her colleagues learned that they could mix together the cytoplasm from the eggs of the two frogs and add in chromosomes. The result was hybrid spindles of intermediate size, suggesting that there is something in the cytoplasm that is determining spindle size.

Rebecca Heald rides through the Pyrenees mountain range in southern France.

Heald’s group is now seeking to identify the factors—they call them scaling factors—that work to regulate the size of the spindle. Subsequent experiments in her lab revealed that spindle size is controlled in two ways: one that depends on the amount of certain proteins, and the other that depends on the specific sequences of those proteins. For example, an enzyme that cuts microtubules, called Katanin, has a slightly different amino acid sequence in the two different frog species. The version of Katanin in X. tropicalis is much more active at chopping microtubules, which makes the spindles in that animal smaller.

Even though, as Heald puts it, “mammals are actually quite boring; all of our genomes and cell-size relationships are pretty much the same,” her work with amphibians has important implications for humans. Under certain circumstances, human cells, and the organelles within them, vary in size. For example, cancer cells are characterized by enlarged and misshapen nuclei. Researchers do not know whether these abnormal cells are a cause, or a result, of disease.

Cancer messes up cells in several other ways. For example, many of the thousands of factors that affect spindle assembly are altered in cancer cells, and it is not clear how these changes impact the spindle.

Cancer cells also tend to be unreliable when it comes to accurately divvying up chromosomes during cell division, resulting in daughter cells that have too many or too few chromosomes. Heald plans to study this phenomenon using the frog Xenopus longipes, whose genome of 108 chromosomes is significantly larger than that of the other frog species (X. laevis has 18 chromosomes, and X. tropicalis has 10). An important question for Heald is how these animals properly segregate such a massive number of chromosomes to two daughter cells.

Heald hopes her research can answer these questions and provide leads on potential cancer therapies and diagnostics.

“One of the wonderful things about cell biology is that you have all these different animals … and you can figure out what is a good question and then find a great system in which to answer that question,” says Heald. “I think amphibians are actually pretty much the ideal system for my research questions.”

This page last reviewed on September 7, 2017